EWAS and GWAS Miner Database - Gene Filter

Manual   Download Files

Step 1: Find genes

1.1 Choose genes from database

You can find genes through implication by EWAS and implication by GWAS.
If more than one implication types are selected, take of the sites found by the selected association types.
You will get all the genes implicated by these sites found in the selected implication types.

Implication by EWAS

If more than one association types are selected, take of the sites found by the selected association types.
You will get all the genes implicated by these sites found in the selected association types.

Association with gene expression
p-value ≤ 10^(- )
Distance between gene and methylation site ≤
Number of Citeline clinical trials on gene ≥

Association with protein levels
p-value ≤ 10^(- )
Distance between gene and methylation site ≤
Number of Citeline clinical trials on gene ≥

Association with clinical and metabolite traits
p-value ≤ 10^(- )
*If selected, must intersect with at least one of the first two association types.
Link trait and gene through association with gene/protein expression
Link trait and gene through proximity
Distance between gene and methylation site ≤
Number of Citeline clinical trials on gene ≥
Please select a list of traits you are interested in:
Clinical trait Metabolite trait
Fat mass weight by NMR
Lean mass weight by NMR
Free fluid by NMR
Total mass by NMR
Body fat percentage by NMR
Body weight
Spleen weight
Femoral fat pad weight
Gonadal fat pad weight
Retroperitoneal fat pad weight
Mesenteric fat pad weight
Femoral fat pad percent weight
Gonadal fat pad percent weight
Retroperitoneal fat pad percent weight
Mesenteric fat pad percent weight
Glucose in plasma (glucometer)
Triglycerides in plasma
Total cholesterol in plasma
High density lipoprotein cholesterol (HDL) in plasma
Unesterified cholesterol in plasma
Free fatty acids in plasma
Glucose in plasma (colorimetric assay)
Insulin in plasma
LDL plus VLDL cholesterol in plasma
Glucose-to-insulin ratio in plasma
Paraoxonase (PON) activity in plasma
Lecithin-cholesterol acyltransferase (LCAT) activity in plasma
Total red blood cell count (RBC) in blood
Mean cell volume of red blood cells (MCV) in blood
Hematocrit, i.e. percentage of the volume in whole blood that consists of red blood cells (HCT)
Mean cell hemoglobin, i.e. average mass of hemoglobin per red blood cell (MCH) in blood
Mean cell hemoglobin concentration (MCHC) in blood
Total platelet count (PLT) in blood
Red blood cell distribution width as percent (RDW%) in blood
Red blood cell distribution width in absolute number (RDWa) in blood
Mean platelet volume (MPV) in blood
Hemoglobin concentration (HGB) in blood
Total white blood cell count (WBC) in blood
Lymphocyte concentration in absolute number (LYMPH) in blood
Monocyte concentration in absolute number (MONO) in blood
Granulocyte concentration in absolute number (GRAN) in blood
Lymphocyte concentration as percent (LYMPH%) in blood
Monocyte concentration as percent (MONO%) in blood
IgM auto-antibodies to malondialdehyde modified low density lipoprotein cholesterol (IgM MDA-LDL) in plasma
IgM auto-antibodies to copper oxidized low density lipoprotein cholesterol (IgM CuOX-LDL) in plasma
IgM natural antibodies anti-phosphorylcholine of T15 idiotype, clone AB1.2 (AB1.2 IgM) in plasma
Phospholipid transfer protein (PLTP) activity in plasma
Kidney weight
Heart weight
Total bone mineral density
Femur bone mineral density
Bone mineral density in lumbar spine L1-L6
Beta-hydroxybutyrate in plasma
Syndecan-1 ectodomains (percent relative to C57BL/6J) in plasma
Apolipoprotein A1 in plasma
Apolipoprotein A2 in plasma
Apolipoprotein A4 in plasma
Apolipoprotein B in plasma
Apolipoprotein C2 in plasma
Apolipoprotein C3 in plasma
Apolipoprotein D in plasma
Apolipoprotein J (Clustrin) in plasma
Lecithin-cholesterol acyltransferase (LCAT) in plasma
Lipoprotein-associated phospholipase A in plasma
Paraoxonase1 (PON1) in plasma
Apolipoprotein serum amyloid A1 in plasma
Homeostatic model assessment of insulin resistance [Fasting plasma (Glucose*Insulin)/405]
Adipose tissue insulin resistance [Fasting plasma (Free fatty acids*Insulin)]
adma
arg
betaine
carnitine
choline
cit
lys
mma
orn
sdma
tmano
cholesterol
1-palmitoylglycerophosphoinositol
linolenate_[alpha_or_gamma;_(18:3n3_or_6)]
N-acetylmethionine
adenosine_5-monophosphate_(AMP)
hypotaurine
7-alpha-hydroxycholesterol
xanthine
tyrosine
margarate_(17:0)
N-acetylornithine
undecanedioate
1-oleoylglycerol_(1-monoolein)
stachydrine
threonate
gamma-glutamylvaline
creatine
methylphosphate
adenosine_3-monophosphate_(3-AMP)
gulono-1,4-lactone
inosine
2-oleoylglycerophosphocholine
azelate_(nonanedioate)
docosadienoate_(22:2n6)
malonate_(propanedioate)
10-nonadecenoate_(19:1n9)
dodecanedioate
taurodeoxycholate
palmitate_(16:0)
gamma-glutamylthreonine
12-dehydrocholate
cholate
1-palmitoylglycerophosphocholine
N-acetylasparagine
1,5-anhydroglucitol_(1,5-AG)
2-linoleoylglycerophosphoethanolamine
docosapentaenoate_(n3_DPA;_22:5n3)
flavin_adenine_dinucleotide_(FAD)
1-linoleoylglycerophosphoethanolamine
leucine
taurine
homoserine
10-heptadecenoate_(17:1n7)
1,3-dipalmitoylglycerol
nicotinamide
serine
histidine
2-eicosatrienoylglycerophosphocholine
beta-muricholate
alanine
2-docosahexaenoylglycerophosphocholine
malonylcarnitine
tauro-beta-muricholate
kynurenine
1,2-dipalmitoylglycerol
biopterin
palmitoleate_(16:1n7)
2-docosapentaenoylglycerophosphoethanolamine
1-oleoylglycerophosphoinositol
kynurenate
methyl-alpha-glucopyranoside
tetradecanedioate
xylitol
glycerol_3-phosphate_(G3P)
laurate_(12:0)
adenosine
ursodeoxycholate
gamma-glutamylglutamate
glycine
1-palmitoleoylglycerophosphocholine
1-palmitoylglycerophosphoethanolamine
carnitine
trans-4-hydroxyproline
cysteine-glutathione_disulfide
trigonelline_(N-methylnicotinate)
7-beta-hydroxycholesterol
UDP-glucose
12-HEPE
isobutyrylcarnitine
hexadecanedioate
1-arachidonoylglycerophosphoethanolamine
2-palmitoylglycerophosphocholine
nonadecanoate_(19:0)
allantoin
methylmalonate_(MMA)
anthranilate
adenine
hydroxyisovaleroyl_carnitine
2-aminobutyrate
glucose
glycerophosphorylcholine_(GPC)
isoleucine
glutarate_(pentanedioate)
phenylalanine
riboflavin_(Vitamin_B2)
maltotetraose
lysine
1-palmitoylglycerol_(1-monopalmitin)
mannose
flavin_mononucleotide_(FMN)
phosphate
myo-inositol
erythronate
eicosenoate_(20:1n9_or_11)
methionine
N2-acetyllysine
ophthalmate
malate
glutamine
spermidine
ribitol
pelargonate_(9:0)
glutathione,_oxidized_(GSSG)
tryptophan
1-myristoylglycerophosphocholine
1-octadecanol
myristate_(14:0)
2-methylbutyroylcarnitine
arachidonate_(20:4n6)
glycerol_2-phosphate
13-HODE_+_9-HODE
2-arachidonoylglycerophosphoethanolamine
gluconate
propionylcarnitine
acetylcarnitine
inositol_1-phosphate_(I1P)
sphingosine
fructose
6-phosphogluconate
S-methylglutathione
chenodeoxycholate
2-docosahexaenoylglycerophosphoethanolamine
2-deoxyinosine
taurocholate
aspartate
2-linoleoylglycerophosphocholine
1,2-propanediol
N1-methyladenosine
ergothioneine
stearidonate_(18:4n3)
citrate
hypoxanthine
butyrylglycine
1-linoleoylglycerol_(1-monolinolein)
stearate_(18:0)
5-aminovalerate
glycylleucine
methionine_sulfoxide
3-dehydrocarnitine
palmitoyl_sphingomyelin
erythritol
glycylvaline
pantothenate
choline_phosphate
2-ketogulonate
gamma-aminobutyrate_(GABA)
5-HETE
betaine
2-aminoadipate
dihomo-linoleate_(20:2n6)
glycylglycine
linoleate_(18:2n6)
threonine
3-aminoisobutyrate
1-arachidonoylglycerophosphoinositol
xylonate
2-hydroxybutyrate_(AHB)
2-oleoylglycerophosphoethanolamine
adenosine_2-monophosphate_(2-AMP)
hexanoylglycine
glycerol
valerylglycine
3-(4-hydroxyphenyl)lactate
N-acetylglycine
1-oleoylglycerophosphocholine
uracil
3-hydroxybutyrate_(BHBA)
urea
cytidine_5-diphosphocholine
18-HEPE
5-methyluridine_(ribothymidine)
pseudouridine
homostachydrine
asparagine
glycylproline
nicotinamide_adenine_dinucleotide_(NAD+)
glycerate
choline
alpha-muricholate
1-stearoylglycerol_(1-monostearin)
S-adenosylhomocysteine_(SAH)
caproate_(6:0)
1-oleoylglycerophosphoethanolamine
C-glycosyltryptophan
phenylacetylglycine
pyridoxate
3-methylcrotonylglycine
cysteine
oleate_(18:1n9)
adrenate_(22:4n6)
ribulose
3-phosphoglycerate
sorbitol
1-linoleoylglycerophosphocholine
ribose
fumarate
thymine
glucarate_(saccharate)
valine
caprate_(10:0)
pipecolate
erythrose
myristoleate_(14:1n5)
citrulline
1-stearoylglycerophosphoethanolamine
lactate
glutamate
phenol_sulfate
acetylphosphate
1-stearoylglycerophosphocholine
xanthosine
guanosine
glutathione,_reduced_(GSH)
inositol_2-phosphate_(I2P)
N-acetylalanine
thiamin_(Vitamin_B1)
beta-alanine
dihomo-linolenate_(20:3n3_or_n6)
dimethylarginine_(SDMA_+_ADMA)
ethanolamine
betaine_aldehyde
ornithine
cis-aconitate
glucuronate
methylglutaroylcarnitine
isovalerylglycine
5-methylthioadenosine_(MTA)
phosphoethanolamine
2-arachidonoylglycerophosphocholine
gamma-glutamylleucine
1-stearoylglycerophosphoinositol
docosahexaenoate_(DHA;_22:6n3)
tiglyl_carnitine
eicosapentaenoate_(EPA;_20:5n3)
6-beta-hydroxylithocholate
adenosine_3,5-diphosphate
isovalerylcarnitine
pentadecanoate_(15:0)
proline

Implication by GWAS

If more than one association types are selected, take of the sites found by the selected association types.
You will get all the genes implicated by these sites found in the selected association types.

Association with gene expression
p-value ≤ 10^(- )
Distance between gene and SNP site ≤
Number of Citeline clinical trials on gene ≥

Association with protein levels
p-value ≤ 10^(- )
Distance between gene and SNP site ≤
Number of Citeline clinical trials on gene ≥

Association with clinical and metabolite traits
p-value ≤ 10^(- )
*If selected, must intersect with at least one of the first two association types.
Link trait and gene through association with gene expression/protein levels
Link trait and gene through proximity
Distance between gene and SNP site ≤
Number of Citeline clinical trials on gene ≥
Please select a list of traits you are interested in:
Clinical trait Metabolite traits
AB1_2_IgM (IgM natural antibodies anti-phosphorylcholine of T15 idiotype, clone AB1.2 (AB1.2 IgM) in plasma)
ApoA2 (Apolipoprotein A2 in plasma)
ApoA4 (Apolipoprotein A4 in plasma)
ApoB (Apolipoprotein B in plasma)
ApoD (Apolipoprotein D in plasma)
ApoE
FFA (Free fatty acids in plasma)
glucose_to_insulin (Glucose-to-insulin ratio in plasma)
GRAN (Granulocyte concentration in absolute number (GRAN) in blood)
GRAN_percent
HCT (Hematocrit, i.e. percentage of the volume in whole blood that consists of red blood cells (HCT))
HDL (High density lipoprotein cholesterol (HDL) in plasma)
HGB (Hemoglobin concentration (HGB) in blood)
Insulin (Insulin in plasma)
IP-10
KC
LCAT_activity (Lecithin-cholesterol acyltransferase (LCAT) activity in plasma)
LDL_plus_VLDL (LDL plus VLDL cholesterol in plasma)
Lean_mass (Lean mass weight by NMR)
LpPLA2 (Lipoprotein-associated phospholipase A in plasma)
LYMPH (Lymphocyte concentration in absolute number (LYMPH) in blood)
LYMPH_percent (Lymphocyte concentration as percent (LYMPH%) in blood)
MCHC (Mean cell hemoglobin concentration (MCHC) in blood)
MCV (Mean cell volume of red blood cells (MCV) in blood)
MIP-2
MONO (Monocyte concentration in absolute number (MONO) in blood)
MPV (Mean platelet volume (MPV) in blood)
PLTPactivity (Phospholipid transfer protein (PLTP) activity in plasma)
RANTES
RBC (Total red blood cell count (RBC) in blood)
RDW_percent (Red blood cell distribution width as percent (RDW%) in blood)
RDWa (Red blood cell distribution width in absolute number (RDWa) in blood)
RFP_percent (Retroperitoneal fat pad percent weight)
TC (Total cholesterol in plasma)
TG (Triglycerides in plasma)
TNFa
UC (Unesterified cholesterol in plasma)
WBC (Total white blood cell count (WBC) in blood)
1-arachidonylglycerol
1-docosahexaenoylglycerol (1-monodocosahexaenoin)
1-heptadecanoylglycerophosphocholine
1-myristoylglycerophosphocholine
1-oleoylglycerol (1-monoolein)
1-palmitoylglycerol (1-monopalmitin)
12-HETE
2-aminoadipate
2-aminobutyrate
2-arachidonoylglycerophosphocholine
2-hydroxyadipate
2-hydroxyglutarate
2-ketogulonate
2-methylbutyroylcarnitine
2-oleoylglycerophosphoethanolamine
3-hydroxy-3-methylglutarate
3-hydroxybutyrate (BHBA)
3-methylcrotonylglycine
3-phosphoglycerate
adenosine 2'-monophosphate (2'-AMP)
adenosine 5'-monophosphate (AMP)
adrenate (22:4n6)
allantoin
arachidate (20:0)
arachidonate (20:4n6)
ascorbate (Vitamin C)
asparagine
butyrylglycine
campesterol
caprate (10:0)
caproate (6:0)
catechol sulfate
choline
creatine
cysteine
cysteine-glutathione disulfide
cytidine
cytidine 5'-diphosphocholine
cytidine 5'-monophosphate (5'-CMP)
deoxycholate
docosadienoate (22:2n6)
docosapentaenoate (n3 DPA; 22:5n3)
eicosenoate (20:1n9 or 11)
gamma-glutamylglutamate
gamma-glutamylisoleucine
gamma-glutamylthreonine
glucarate (saccharate)
glutathione, oxidized (GSSG)
glycerol
glycerol 3-phosphate (G3P)
glycerophosphorylcholine (GPC)
glycocholate
gulono-1,4-lactone
heme
hexadecanedioate
homoserine
homostachydrine
hydroxyisovaleroyl carnitine
hypotaurine
hypoxanthine
isobutyrylcarnitine
isovalerylcarnitine
isovalerylglycine
kynurenate
malonate (propanedioate)
malonylcarnitine
margarate (17:0)
methylmalonate (MMA)
N-acetylasparagine
N-acetylglutamate
N-acetylmethionine
N-acetylthreonine
naringenin
ophthalmate
pelargonate (9:0)
proline
pseudouridine
pyridoxate
pyruvate
riboflavin (Vitamin B2)
spermidine
stachydrine
succinate
succinylcarnitine
taurine
taurochenodeoxycholate
taurodeoxycholate
tetradecanedioate
threonate
thymidine
tiglyl carnitine
trans-4-hydroxyproline
tyrosine
uridine
xylonate

Step 2: Choose terms

2.1 Choose curated terms

Curated terms for obesity
abdominal fat
actb
adh5
adipocyte
adipogenesis
adiponectin
adipose tissue
adiposity
alcohol consumption
alcohol drinking
alzheimer disease
aneurysm
apolipoprotein
apolipoprotein a-i
apolipoprotein a-ii
apolipoprotein b-100
apolipoproteins e
appetite
arachidonic acid
arteriosclerosis
asph
atherosclerosis
bdnf
birth weight
blood glucose
body fat
body mass index
body surface area
body weight
bone density
calcium
caloric intake
cardiomyopathies
cardiovascular disease
carotid artery disease
carotid stenosis
casp1
ceramides
cerebrovascular disorder
chemokine
cholesterol
cholesterol hdl
cholesterol ldl
chromatin
coronary aneurysm
coronary arteriosclerosis
coronary disease
cox7a1
cytokine
diabetes
diabetes mellitus
diabetes mellitus type 1
diabetes mellitus type 2
diabetic angiopathies
diabetic nephropathies
dietary fat
dna methylation
embolism
endoplasmic reticulum
endothelial cell
energy expenditure
etv5
exercise
fast food
fat mass
fats
fats unsaturated
fatty acids
fatty acids monounsaturated
fatty acids omega-3
fatty acids omega-6
fatty acids unsaturated
fbxo15
foam cell
food consumption
fto
gabpa
glucose
glucose transporter type 1
glucose-6-phosphate
glyceride
heart
hepatocyte
hypercholesterolemia
hyperglycemia
hyperlipidemia
hypertension
hypertriglyceridemia
hypoglycemia
hypothalamus
inflammation
insulin
insulin resistance
insulin-like growth factor i
insulin-like growth factor ii
insulin-secreting cell
insulinoma
intra-abdominal fat
ischemia
islet cell
jak1
kpna3
kupffer cell
leptin
leukotriene
lipases
lipid
lipid metabolism
lipid peroxidation
lipogenesis
lipolysis
lipopolysaccharide
lipoprotein
lipoproteins vldl
liver
liver failure
lysophospholipid
macrophage
maf
membrane lipid
metabolic rate
metabolic syndrome x
metabolism
microbiome
mitochondria
myocardial infarction
obesity
oil
oleic acid
organ size
osteoporosis
overweight
palmitate
pancreas
parp1
pdcd10
phosphatidylinositol
phospholipid
physical activity
prl
prostaglandin
pter
purkinje cell
receptor insulin
sedentary lifestyle
serotonin
skinfold thickness
smoking
sphingolipid
steatosis
subcutaneous fat
t lymphocytes
thrombosis
thromboxane a2
triglyceride
vasculitis
weight gain
weight loss

2.2 Append your own terms

Please enter terms here

Step 3: Choose search scope

Title and abstract Full text